[bug#43345,10/12] gnu: r-phangorn: Move to (gnu packages cran).
diff mbox series

Message ID 20200911180849.12582-12-zimon.toutoune@gmail.com
State New
Headers show
Series
  • Move some CRAN packages to (gnu packages cran).
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Commit Message

zimoun Sept. 11, 2020, 6:08 p.m. UTC
* gnu/packages/bioinformatics.scm (r-phangorn): Move from here ...
* gnu/packages/cran.scm (r-phangorn): ... to here.
---
 gnu/packages/bioinformatics.scm | 28 ----------------------------
 gnu/packages/cran.scm           | 28 ++++++++++++++++++++++++++++
 2 files changed, 28 insertions(+), 28 deletions(-)

Patch
diff mbox series

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index a6505099fc..bec6c1dc4a 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -10936,34 +10936,6 @@  are optimized per data type and for subsetted calculations such that both
 memory usage and processing time is minimized.")
     (license license:expat)))
 
-(define-public r-phangorn
-  (package
-    (name "r-phangorn")
-    (version "2.5.5")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (cran-uri "phangorn" version))
-       (sha256
-        (base32
-         "0ihkaykqjmf80d8wrk3saphxvnv58zma6pd13633bd3cwanc33f5"))))
-    (build-system r-build-system)
-    (propagated-inputs
-     `(("r-ape" ,r-ape)
-       ("r-fastmatch" ,r-fastmatch)
-       ("r-igraph" ,r-igraph)
-       ("r-magrittr" ,r-magrittr)
-       ("r-matrix" ,r-matrix)
-       ("r-quadprog" ,r-quadprog)
-       ("r-rcpp" ,r-rcpp)))
-    (home-page "https://github.com/KlausVigo/phangorn")
-    (synopsis "Phylogenetic analysis in R")
-    (description
-     "Phangorn is a package for phylogenetic analysis in R.  It supports
-estimation of phylogenetic trees and networks using Maximum Likelihood,
-Maximum Parsimony, distance methods and Hadamard conjugation.")
-    (license license:gpl2+)))
-
 (define-public r-dropbead
   (let ((commit "d746c6f3b32110428ea56d6a0001ce52a251c247")
         (revision "2"))
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 8b2a5fc1dc..140ce11aac 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -23867,3 +23867,31 @@  dimensionality reduction; PCA, ICA, t-SNE, standard unsupervised clustering
 algorithms; density clustering, hierarchical clustering, k-means, and the
 discovery of differentially expressed genes and markers.")
     (license license:gpl3)))
+
+(define-public r-phangorn
+  (package
+    (name "r-phangorn")
+    (version "2.5.5")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (cran-uri "phangorn" version))
+       (sha256
+        (base32
+         "0ihkaykqjmf80d8wrk3saphxvnv58zma6pd13633bd3cwanc33f5"))))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-ape" ,r-ape)
+       ("r-fastmatch" ,r-fastmatch)
+       ("r-igraph" ,r-igraph)
+       ("r-magrittr" ,r-magrittr)
+       ("r-matrix" ,r-matrix)
+       ("r-quadprog" ,r-quadprog)
+       ("r-rcpp" ,r-rcpp)))
+    (home-page "https://github.com/KlausVigo/phangorn")
+    (synopsis "Phylogenetic analysis in R")
+    (description
+     "Phangorn is a package for phylogenetic analysis in R.  It supports
+estimation of phylogenetic trees and networks using Maximum Likelihood,
+Maximum Parsimony, distance methods and Hadamard conjugation.")
+    (license license:gpl2+)))