[bug#43345,11/12] gnu: r-diversitree: Move to (gnu packages cran).
diff mbox series

Message ID 20200911180849.12582-10-zimon.toutoune@gmail.com
State New
Headers show
Series
  • Move some CRAN packages to (gnu packages cran).
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Commit Message

zimoun Sept. 11, 2020, 6:08 p.m. UTC
* gnu/packages/bioinformatics.scm (r-diversitree): Move from here ...
* gnu/packages/cran.scm (r-diversitree): ... to here.
---
 gnu/packages/bioinformatics.scm | 31 -------------------------------
 gnu/packages/cran.scm           | 31 +++++++++++++++++++++++++++++++
 2 files changed, 31 insertions(+), 31 deletions(-)

Patch
diff mbox series

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index bec6c1dc4a..6381523009 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -13084,37 +13084,6 @@  analyses in addition to large-scale sequence-level searches.")
       (supported-systems '("x86_64-linux"))
       (license license:bsd-3))))
 
-(define-public r-diversitree
-  (package
-    (name "r-diversitree")
-    (version "0.9-13")
-    (source
-      (origin
-        (method url-fetch)
-        (uri (cran-uri "diversitree" version))
-        (sha256
-         (base32
-          "00vi4klywi35hd170ksjv3xja3hqqbkcidcnrrlpgv4179k0azix"))))
-    (build-system r-build-system)
-    (native-inputs
-     `(("gfortran" ,gfortran)))
-    (inputs `(("fftw" ,fftw) ("gsl" ,gsl)))
-    (propagated-inputs
-     `(("r-ape" ,r-ape)
-       ("r-desolve" ,r-desolve)
-       ("r-rcpp" ,r-rcpp)
-       ("r-subplex" ,r-subplex)))
-    (home-page "https://www.zoology.ubc.ca/prog/diversitree")
-    (synopsis "Comparative 'phylogenetic' analyses of diversification")
-    (description "This package contains a number of comparative \"phylogenetic\"
-methods, mostly focusing on analysing diversification and character evolution.
-Contains implementations of \"BiSSE\" (Binary State Speciation and Extinction)
-and its unresolved tree extensions, \"MuSSE\" (Multiple State Speciation and
-Extinction), \"QuaSSE\", \"GeoSSE\", and \"BiSSE-ness\" Other included methods
-include Markov models of discrete and continuous trait evolution and constant
-rate speciation and extinction.")
-    (license license:gpl2+)))
-
 (define-public sjcount
   ;; There is no tag for version 3.2, nor is there a release archive.
   (let ((commit "292d3917cadb3f6834c81e509c30e61cd7ead6e5")
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 140ce11aac..5b65d2a372 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -23895,3 +23895,34 @@  discovery of differentially expressed genes and markers.")
 estimation of phylogenetic trees and networks using Maximum Likelihood,
 Maximum Parsimony, distance methods and Hadamard conjugation.")
     (license license:gpl2+)))
+
+(define-public r-diversitree
+  (package
+    (name "r-diversitree")
+    (version "0.9-13")
+    (source
+      (origin
+        (method url-fetch)
+        (uri (cran-uri "diversitree" version))
+        (sha256
+         (base32
+          "00vi4klywi35hd170ksjv3xja3hqqbkcidcnrrlpgv4179k0azix"))))
+    (build-system r-build-system)
+    (native-inputs
+     `(("gfortran" ,gfortran)))
+    (inputs `(("fftw" ,fftw) ("gsl" ,gsl)))
+    (propagated-inputs
+     `(("r-ape" ,r-ape)
+       ("r-desolve" ,r-desolve)
+       ("r-rcpp" ,r-rcpp)
+       ("r-subplex" ,r-subplex)))
+    (home-page "https://www.zoology.ubc.ca/prog/diversitree")
+    (synopsis "Comparative 'phylogenetic' analyses of diversification")
+    (description "This package contains a number of comparative \"phylogenetic\"
+methods, mostly focusing on analysing diversification and character evolution.
+Contains implementations of \"BiSSE\" (Binary State Speciation and Extinction)
+and its unresolved tree extensions, \"MuSSE\" (Multiple State Speciation and
+Extinction), \"QuaSSE\", \"GeoSSE\", and \"BiSSE-ness\" Other included methods
+include Markov models of discrete and continuous trait evolution and constant
+rate speciation and extinction.")
+    (license license:gpl2+)))